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El-said S.A.,Zagazig University | Osamaa A.,Zagazig University | Hassanien A.E.,Cairo University | Hassanien A.E.,Scientific Research Group in Egypt SRGE
Soft Computing | Year: 2015

Wireless sensor networks are battery-powered ad hoc networks in which sensor nodes that are scattered over a region connect to each other and form multi-hop networks. Since these networks consist of sensors that are battery operated, care has to be taken so that these sensors use energy efficiently. This paper proposes an optimized hierarchical routing technique which aims to reduce the energy consumption and prolong network lifetime. In this technique, the selection of optimal cluster head (CHs) locations is based on artificial fish swarm algorithm that applies various behaviors such as preying, swarming, and following to the formulated clusters and then uses a fitness function to compare the outputs of these behaviors to select the best CHs locations. To prove the efficiency of the proposed technique, its performance is analyzed and compared to two other well-known energy efficient routing techniques: low-energy adaptive clustering hierarchy (LEACH) technique and particle swarm optimized (PSO) routing technique. Simulation results show the stability and efficiency of the proposed technique. Simulation results show that the proposed method outperforms both LEACH and PSO in terms of energy consumption, number of alive nodes, first node die, network lifetime, and total data packets received by the base station. This may be due to considering residual energies of nodes and their distance from base station , and alternating the CH role among cluster’s members. Alternating the CH role balances energy consumption and saves more energy in nodes. © 2015 Springer-Verlag Berlin Heidelberg

Azar A.T.,Benha University | Hassanien A.E.,Cairo University | Hassanien A.E.,Scientific Research Group in Egypt SRGE
Soft Computing | Year: 2015

Massive and complex data are generated every day in many fields. Complex data refer to data sets that are so large that conventional database management and data analysis tools are insufficient to deal with them. Managing and analysis of medical big data involve many different issues regarding their structure, storage and analysis. In this paper, linguistic hedges neuro-fuzzy classifier with selected features (LHNFCSF) is presented for dimensionality reduction, feature selection and classification. Four real-world data sets are provided to demonstrate the performance of the proposed neuro-fuzzy classifier. The new classifier is compared with the other classifiers for different classification problems. The results indicated that applying LHNFCSF not only reduces the dimensions of the problem, but also improves classification performance by discarding redundant, noise-corrupted, or unimportant features. The results strongly suggest that the proposed method not only help reducing the dimensionality of large data sets but also can speed up the computation time of a learning algorithm and simplify the classification tasks. © 2014, Springer-Verlag Berlin Heidelberg.

Azar A.T.,Benha University | Azar A.T.,Scientific Research Group in Egypt SRGE | El-Said S.A.,Zagazig University | Hassanien A.E.,Cairo University
Computer Methods and Programs in Biomedicine | Year: 2013

Thyroid hormones produced by the thyroid gland help regulation of the body's metabolism. A variety of methods have been proposed in the literature for thyroid disease classification. As far as we know, clustering techniques have not been used in thyroid diseases data set so far. This paper proposes a comparison between hard and fuzzy clustering algorithms for thyroid diseases data set in order to find the optimal number of clusters. Different scalar validity measures are used in comparing the performances of the proposed clustering systems. To demonstrate the performance of each algorithm, the feature values that represent thyroid disease are used as input for the system. Several runs are carried out and recorded with a different number of clusters being specified for each run (between 2 and 11), so as to establish the optimum number of clusters. To find the optimal number of clusters, the so-called elbow criterion is applied. The experimental results revealed that for all algorithms, the elbow was located at c= 3. The clustering results for all algorithms are then visualized by the Sammon mapping method to find a low-dimensional (normally 2D or 3D) representation of a set of points distributed in a high dimensional pattern space. At the end of this study, some recommendations are formulated to improve determining the actual number of clusters present in the data set. © 2013 Elsevier Ireland Ltd.

Ayeldeen H.,Cairo University | Hassanien A.E.,Cairo University | Fahmy A.A.,Scientific Research Group in Egypt SRGE
ICET 2014 - 2nd International Conference on Engineering and Technology | Year: 2015

Knowledge exaction and text representation are considered as the main concepts concerning organizations nowadays. The estimation of the semantic similarity between words provides a valuable method to enable the understanding of texts. In the field of biomedical domains, using Ontologies have been very effective due to their scalability and efficiency. In this paper, we aim to cluster and classify medical thesis data to better discover the commonalities between theses data and hence, improve the accuracy of the similarity estimation which in return improves the scientific research sector. Experimental evaluations using 4,878 theses data set in the medical sector at Cairo University indicate that the proposed approach yields results that correlate more closely with human assessments than other by using the standard ontology (MeSH). Two different algorithms were used; the first is Lexical similarity and then applying K-means clustering and the second is fuzzy Euclidean distance clustering algorithm after using MeSH ontology on medical theses data for better categorization of the keywords within the data. © 2014 IEEE.

Hassanien A.E.,Cairo University | Hassanien A.E.,Scientific Research Group in Egypt SRGE | Al-Shammari E.T.,Kuwait University | Ghali N.I.,Al - Azhar University of Egypt | Ghali N.I.,Scientific Research Group in Egypt SRGE
Computational Biology and Chemistry | Year: 2013

Computational intelligence (CI) is a well-established paradigm with current systems having many of the characteristics of biological computers and capable of performing a variety of tasks that are difficult to do using conventional techniques. It is a methodology involving adaptive mechanisms and/or an ability to learn that facilitate intelligent behavior in complex and changing environments, such that the system is perceived to possess one or more attributes of reason, such as generalization, discovery, association and abstraction. The objective of this article is to present to the CI and bioinformatics research communities some of the state-of-the-art in CI applications to bioinformatics and motivate research in new trend-setting directions. In this article, we present an overview of the CI techniques in bioinformatics. We will show how CI techniques including neural networks, restricted Boltzmann machine, deep belief network, fuzzy logic, rough sets, evolutionary algorithms (EA), genetic algorithms (GA), swarm intelligence, artificial immune systems and support vector machines, could be successfully employed to tackle various problems such as gene expression clustering and classification, protein sequence classification, gene selection, DNA fragment assembly, multiple sequence alignment, and protein function prediction and its structure. We discuss some representative methods to provide inspiring examples to illustrate how CI can be utilized to address these problems and how bioinformatics data can be characterized by CI. Challenges to be addressed and future directions of research are also presented and an extensive bibliography is included. © 2013 Elsevier Ltd.

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