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Marche L.,French National Institute for Agricultural Research | Saraoui T.,French National Institute for Agricultural Research | Saraoui T.,French Research Institute for Exploitation of the Sea | Saraoui T.,Clermont University | And 7 more authors.
Genome Announcements | Year: 2017

Lactococcus piscium CNCM I-4031 is a psychotrophic foodborne lactic acid bacterium showing potential interest for the biopreservation of seafood products due to its inhibition properties toward pathogenic and spoilage bacteria. The analysis of its genome will provide a better understanding of the mechanisms of interaction between these bacteria. © 2017 Marché et al.

Desprez-Loustau M.-L.,French National Institute for Agricultural Research | Desprez-Loustau M.-L.,University of Bordeaux 1 | Aguayo J.,Laboratoire Of La Sante Des Vegetaux Lsv | Dutech C.,French National Institute for Agricultural Research | And 14 more authors.
Annals of Forest Science | Year: 2016

Key message: Increasing human impacts on forests, including unintentional movement of pathogens, climate change, and large-scale intensive plantations, are associated with an unprecedented rate of new diseases. An evolutionary ecology perspective can help address these challenges and provide direction for sustainable forest management. Context: Forest pathology has historically relied on an ecological approach to understand and address the practical management of forest diseases. A widening of this perspective to include evolutionary considerations has been increasingly developed in response to the rising rates of genetic change in both pathogen populations and tree populations due to human activities. Aims: Here, five topics for which the evolutionary perspective is especially relevant are highlighted. Results: The first relates to the evolutionary diversity of fungi and fungal-like organisms, with issues linked to the identification of species and their ecological niches. The second theme deals with the evolutionary processes that allow forest pathogens to adapt to new hosts after introductions or to become more virulent in homogeneous plantations. The third theme presents issues linked to disease resistance in tree breeding programs (e.g., growth-defense trade-offs) and proposes new criteria and methods for more durable resistance. The last two themes are dedicated to the biotic environment of the tree–pathogen system, namely, hyperparasites and tree microbiota, as possible solutions for health management. Conclusion: We conclude by highlighting three major conceptual advances brought by evolutionary biology, i.e., that (i) “not everything is everywhere”, (ii) evolution of pathogen populations can occur on short time scales, and (iii) the tree is a multitrophic community. We further translate these into a framework for immediate policy recommendations and future directions for research. © 2015, INRA and Springer-Verlag France.

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