Maree R.,GIGA Bioinformatics Core Facility |
Maree R.,GIGA Research |
Maree R.,Montefiore Institute |
Rollus L.,GIGA Research |
And 11 more authors.
2014 IEEE 11th International Symposium on Biomedical Imaging, ISBI 2014 | Year: 2014
We present a novel methodology combining web-based software development practices, machine learning, and spatial databases for computer-aided quantification of regions of interest (ROIs) in large-scale imaging data. We describe our main methodological choices, and then illustrate the benefits of the approach (workload reduction, improved precision, scalability, and traceability) on hundreds of whole-slide images of biological tissue slices in cancer research. © 2014 IEEE.